Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801493.1_cds_XP_016475330.1_6696
CDS Infomation

[gene=LOC107797011] [db_xref=GeneID:107797011] [protein=E3 ubiquitin-protein ligase MBR2-like] [protein_id=XP_016475330.1] [location=complement(join(32100..32231,32351..32494,32570..32668,33476..33526,34322..36058))] [gbkey=CDS]
Sequence

ATGCAAGGGAAACGAAGTTCCATCGGTTCATTTTCAGAAACTTTAGATTTTGGTTCTACT
TCAACATCGGGTGATGGTATAGATCAGCAGATGTGTTGGAATAGTCGTGTACCAGATTAT
GTGGTATCACCTAATCAGAATAATATTTCTTTTCTTAATCCTGTGAGCCATGAGAGACAG
AACATAATGGGGTGGGGTTTCGGAGAACCGAGCTCCACAAATCATGCTGGTCAGAGTGAA
CGAAAAACAGATCATGGTTGGTCATCTACAATGAATGCATGTCCTGAACCTTCTCACTTC
TCTGACGAACATCAATATGGGTCGCCCAACATTCTTTCATTGAGTAATGTAGAAGTAAAT
TTGAACAGTGTTCAGATGGCTAACAGCAGTATATTCTCTCAAGGTTCTAGTCCAACTACC
CTTCCTCATGATATGAACACAAATTCAGGGTTTGAGGGGCACCATGGTGATGATGACAGT
GAAGATGACTGTCAAATAATGGAATGTACTCCAGCATACAAGTCTGATTTACCAGGAAAA
GAGTGGATGTCATCTGCTACTACATGTCATACTTTTGCTGGGCCTTTTGGTACTAATGGA
TTCTTGATAGATGAAAATGATGGCAGGCCAGGCTCTTCGTTGGATGGTCGTCGCTTATCT
TGCAAGAGAAAAGCACTTGAAGGACATCTGGGCCAATCTTCAGCAAGTGGAAGTAGAAAT
TATATTCCACATGCCGAAAACAGCTTATGGCATTCTCTACCTTCTCCACATAGTATGGGC
ACAGGTGCAAGTATCTGTGCTCCAACAGAAGGGAGCGGAAGCATTAATTTGTCAGAGCAG
CTTAACCCAAGACTTGGGCTTTCAATGGGAGGAACCATTTCAGAAAGTCCACTTCGTTTA
CCTGCTTCTGGAATTGCCGAAAGTTCCCGTAATACTTTCAGGCTGAGGGTTAATAGCTCA
CATCAACAAGATACCATTCCTAGTAACCTGTTTCCTGCTGTGGGTGATGCTGGAAATGTT
AATGTGTCATCTGACTGGCACTCATCGAGGGTCTTCCATAATAATTCTTTGAACTTGATG
TCGATGTCTGCAGCTGATAATGTAAATCCTCAAAGCCAGGCCTCGGTGGTCCATGTTCCT
TCTCTGCATCGAAGTTCACAGGCTAGGTGGGATTTAGCACCTAACTCAAGAACTAGCAGT
TCATCAAGCTTTTATGCATCTGGAGAGAGAGACTCTGCACCATATCAAGAACCCCACTCA
AGAAGTTTGTCAAGGAACATTTCACATCATCCAATGTTTATACCTGTTACTGATGCAAGA
AATCTGAACCAAAATCCTGCCAACTGGAGTTTAGCTGGTGGTGGGAATATTTCCATTGTT
GGAAATGTTGCATCCACATCTCGAAGTAGCTCGAGTTCACGCTCCCACTTGTCTTCTCCT
TCTCGGGTTCAACACAGAAATCCTCCACAATATTCCCGGAGACTGTCTGAATATGTCCGA
AGGTCTTTGTTGTCTTCAGCAGATGCTGAACCTGGAGGTCGTAGTGGTAATAGTCCTTCG
CTATGTCTGAGTGCTGCCTCTCGGGTGTTGGAGCTTTCTGGCAATCATGGACATCGTCAA
TCAAGGTCAAGGTCCACAGCATTGTCGGAGAGACATCTTGATGGTGGTATAGGAGTTTCT
CATTCTTGGAGGACTTTGGCTGCTGCCAGTGAAGGAAGAAGCAGGCTAGTCTCTGAGATT
CGCAATGTATTGGATCTTATGCGCAGGGGAGAAGGCTTACAACTTGAGGATGTTATGATC
CTTGATCAGTCAGTCTTCTTTGGGATGGCGGATATTCATGATCGCCATAGGGATATGCGG
GTTGATGTTGATAACATGTCATATGAGGAGTTACTGGCACTTGAAGAGCGCATTGGGAAT
GTGTGCACTGGACTGGGCGAAGAAGCTATTTTGAGCCATTTGAAGCAACGCAGCTATATT
TGTGTTAAATCAGAAGAACCCATCGATGCAGAGCCATGCTGTATATGTCAGGAAGAATAT
AATGATGGAGAGGATCTTGGTACACTGGAGTGTGGCCATGATTTTCATAGAGACTGCATT
AAACAATGGCTCAAACACAAGAATATATGCCCCATTTGCAAAACAACGGGGCTGAATACC
TGA

Peptide Sequence

PEP ID

XP_016475330.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana tabacum]
Sequence

MQGKRSSIGSFSETLDFGSTSTSGDGIDQQMCWNSRVPDYVVSPNQNNISFLNPVSHERQ
NIMGWGFGEPSSTNHAGQSERKTDHGWSSTMNACPEPSHFSDEHQYGSPNILSLSNVEVN
LNSVQMANSSIFSQGSSPTTLPHDMNTNSGFEGHHGDDDSEDDCQIMECTPAYKSDLPGK
EWMSSATTCHTFAGPFGTNGFLIDENDGRPGSSLDGRRLSCKRKALEGHLGQSSASGSRN
YIPHAENSLWHSLPSPHSMGTGASICAPTEGSGSINLSEQLNPRLGLSMGGTISESPLRL
PASGIAESSRNTFRLRVNSSHQQDTIPSNLFPAVGDAGNVNVSSDWHSSRVFHNNSLNLM
SMSAADNVNPQSQASVVHVPSLHRSSQARWDLAPNSRTSSSSSFYASGERDSAPYQEPHS
RSLSRNISHHPMFIPVTDARNLNQNPANWSLAGGGNISIVGNVASTSRSSSSSRSHLSSP
SRVQHRNPPQYSRRLSEYVRRSLLSSADAEPGGRSGNSPSLCLSAASRVLELSGNHGHRQ
SRSRSTALSERHLDGGIGVSHSWRTLAAASEGRSRLVSEIRNVLDLMRRGEGLQLEDVMI
LDQSVFFGMADIHDRHRDMRVDVDNMSYEELLALEERIGNVCTGLGEEAILSHLKQRSYI
CVKSEEPIDAEPCCICQEEYNDGEDLGTLECGHDFHRDCIKQWLKHKNICPICKTTGLNT

Transcript Sequence

Gene sequence data has not been registered.